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Author SHA1 Message Date
Montana Low
403d3f2348 add seed param to search params (#168) 2022-09-22 00:15:26 +01:00
morenol
3a44161406 Lmm/add seeds in more algorithms (#164) 
* Provide better output in flaky tests

* feat: add seed parameter to multiple algorithms

* Update changelog

Co-authored-by: Luis Moreno <morenol@users.noreply.github.com>
 2022-09-21 20:35:22 +01:00
Montana Low
48514d1b15 Complete grid search params (#166) 
* grid search draft

* hyperparam search for linear estimators

* grid search for ensembles

* support grid search for more algos

* grid search for unsupervised algos

* minor cleanup
 2022-09-21 20:34:21 +01:00
morenol
69d8be35de Provide better output in flaky tests (#163) 2022-09-20 17:12:09 +01:00
morenol
c21e75276a feat: allocate first and then proceed to create matrix from Vec of Ro… (#159) 
* feat: allocate first and then proceed to create matrix from Vec of RowVectors
 2022-09-20 11:29:54 +01:00
morenol
6a2e10452f Make rand_distr optional (#161) 2022-09-20 11:21:02 +01:00
Lorenzo
436da104d7 Update LICENSE 2022-09-19 18:00:17 +01:00
morenol
2510ca4e9d fix: fix compilation warnings when running only with default features (#160) 
* fix: fix compilation warnings when running only with default features
Co-authored-by: Luis Moreno <morenol@users.noreply.github.com>
 2022-09-19 10:44:01 -04:00
Tim Toebrock
b6f585e60f Implement a generic read_csv method (#147) 
* feat: Add interface to build `Matrix` from rows.
* feat: Add option to derive `RealNumber` from string.
To construct a `Matrix` from csv, and therefore from string, I need to be able to deserialize a generic `RealNumber` from string.
* feat: Implement `Matrix::read_csv`.
 2022-09-19 10:38:01 +01:00
Montana Low
4685fc73e0 grid search (#154) 
* grid search draft
* hyperparam search for linear estimators
 2022-09-19 10:31:56 +01:00
Montana Low
2e5f88fad8 Handle multiclass precision/recall (#152) 
* handle multiclass precision/recall
 2022-09-13 16:23:45 +01:00
dependabot[bot]
e445f0d558 Update criterion requirement from 0.3 to 0.4 (#150) 
* Update criterion requirement from 0.3 to 0.4

Updates the requirements on [criterion](https://github.com/bheisler/criterion.rs) to permit the latest version.
- [Release notes](https://github.com/bheisler/criterion.rs/releases)
- [Changelog](https://github.com/bheisler/criterion.rs/blob/master/CHANGELOG.md)
- [Commits](https://github.com/bheisler/criterion.rs/compare/0.3.0...0.4.0)

---
updated-dependencies:
- dependency-name: criterion
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

* fix criterion

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Luis Moreno <morenol@users.noreply.github.com>
 2022-09-12 12:03:43 -04:00
Christos Katsakioris
4d5f64c758 Add serde for StandardScaler (#148) 
* Derive `serde::Serialize` and `serde::Deserialize` for
  `StandardScaler`.
* Add relevant unit test.

Signed-off-by: Christos Katsakioris <ckatsak@gmail.com>

Signed-off-by: Christos Katsakioris <ckatsak@gmail.com>
 2022-09-06 18:37:54 +01:00
Tim Toebrock
d305406dfd Implementation of Standard scaler (#143) 
* docs: Fix typo in doc for categorical transformer.
* feat: Add option to take a column from Matrix.
I created the method `Matrix::take_column` that uses the `Matrix::take`-interface to extract a single column from a matrix. I need that feature in the implementation of  `StandardScaler`.
* feat: Add `StandardScaler`.
Authored-by: titoeb <timtoebrock@googlemail.com>
 2022-08-26 15:20:20 +01:00
Lorenzo
3d2f4f71fa Add example for FastPair (#144) 
* Add example

* Move to top

* Add imports to example

* Fix imports
 2022-08-24 13:40:22 +01:00
Lorenzo
a1c56a859e Implement fastpair (#142) 
* initial fastpair implementation
* FastPair initial implementation
* implement fastpair
* Add random test
* Add bench for fastpair
* Refactor with constructor for FastPair
* Add serialization for PairwiseDistance
* Add fp_bench feature for fastpair bench
 2022-08-23 16:56:21 +01:00
Chris McComb
d905ebea15 Added additional doctest and fixed indices (#141) 2022-08-12 17:38:13 -04:00
morenol
b482acdc8d Fix clippy warnings (#139) 
Co-authored-by: Luis Moreno <morenol@users.noreply.github.com>
 2022-07-13 21:06:05 -04:00
ferrouille
b4a807eb9f Add SVC::decision_function (#135) 2022-06-21 12:48:16 -04:00
dependabot[bot]
ff456df0a4 Update nalgebra requirement from 0.23.0 to 0.31.0 (#128) 
Updates the requirements on [nalgebra](https://github.com/dimforge/nalgebra) to permit the latest version.
- [Release notes](https://github.com/dimforge/nalgebra/releases)
- [Changelog](https://github.com/dimforge/nalgebra/blob/dev/CHANGELOG.md)
- [Commits](https://github.com/dimforge/nalgebra/compare/v0.23.0...v0.31.0)

---
updated-dependencies:
- dependency-name: nalgebra
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2022-05-11 13:14:14 -04:00
dependabot-preview[bot]
322610c7fb build(deps): update nalgebra requirement from 0.23.0 to 0.26.2 (#98) 
* build(deps): update nalgebra requirement from 0.23.0 to 0.26.2

Updates the requirements on [nalgebra](https://github.com/dimforge/nalgebra) to permit the latest version.
- [Release notes](https://github.com/dimforge/nalgebra/releases)
- [Changelog](https://github.com/dimforge/nalgebra/blob/dev/CHANGELOG.md)
- [Commits](https://github.com/dimforge/nalgebra/compare/v0.23.0...v0.26.2)

Signed-off-by: dependabot-preview[bot] <support@dependabot.com>

* fix: updates for nalgebre

* test: explicitly call pow_mut from BaseVector since now it conflicts with nalgebra implementation

* Don't be strict with dependencies

Co-authored-by: dependabot-preview[bot] <27856297+dependabot-preview[bot]@users.noreply.github.com>
Co-authored-by: Luis Moreno <morenol@users.noreply.github.com>
 2022-05-11 13:04:27 -04:00
morenol
70df9a8b49 Merge pull request #133 from smartcorelib/release-0.2.1 
Release 0.2.1
 2022-05-10 08:57:53 -04:00
Volodymyr Orlov
7ea620e6fd Updates version to 0.2.1 2022-05-09 16:03:05 -07:00
VolodymyrOrlov
db5edcf67a Merge pull request #132 from smartcorelib/formatting-fix 
Fixes broken build
 2022-05-09 15:56:22 -07:00
Volodymyr Orlov
8297cbe67e Fixes broken build 2022-05-09 15:50:25 -07:00
VolodymyrOrlov
38c9b5ad2f Merge pull request #126 from ericschief/cover-tree-fix 
Fix issue with cover tree k-nearest neighbors
 2022-05-09 15:34:10 -07:00
morenol
820201e920 Solve conflic with num-traits (#130) 
* Solve conflic with num-traits

* Fix clippy warnings

Co-authored-by: Luis Moreno <morenol@users.noreply.github.com>
 2022-05-05 10:39:18 -04:00
Kiran Eiden
389b0e8e67 Only sort in CoverTree::find function if there are more than k points 
Sorting only needs to be done if the list of KNN candidates is greater
than length k.
 2022-01-04 14:50:47 -08:00
Kiran Eiden
f93286ffbd Fix bug in cover tree KNN algorithm 
Prior to this change, the find function implementation for the
CoverTree class could have potentially returned the wrong result
in cases where there were multiple points in the dataset
equidistant from p. For example, the current test passed for k=3
but failed to produce the correct result for k=4 (it claimed that
3, 4, 5, and 7 were the 4 closest points to 5 in the dataset
rather than 3, 4, 5, and 6). Sorting the neighbors vector before
collecting the first k values from it resolved this issue.
 2022-01-02 20:05:39 -08:00
Malte Londschien
12c102d02b Allow setting seed for RandomForestClassifier and Regressor (#120) 
* Seed for the classifier.

* Seed for the regressor.

* Forgot one.

* typo.
 2021-11-10 20:51:24 -04:00
VolodymyrOrlov
521dab49ef Merge pull request #116 from mlondschien/issue-115 
Add OOB predictions to random forests
 2021-10-28 08:10:09 -07:00
Malte Londschien
3bf8813946 Merge branch 'development' into issue-115 2021-10-28 09:54:22 +02:00
VolodymyrOrlov
7830946ecb Merge pull request #117 from morenol/lmm/fix_clippy 
Fix clippy warnings
 2021-10-27 11:01:16 -07:00
VolodymyrOrlov
813c7ab233 Merge pull request #110 from morenol/nb/fix_docs 
docs: fix documentation of naive bayes structs
 2021-10-27 11:00:12 -07:00
Luis Moreno
4397c91570 Fix clippy warnings 2021-10-20 14:15:41 -05:00
Malte Londschien
14245e15ad type error. 2021-10-20 17:13:00 +02:00
Malte Londschien
d0a4ccbe20 Set keep_samples attribute. 2021-10-20 17:09:13 +02:00
Malte Londschien
85b9fde9a7 Another format. 2021-10-20 17:04:24 +02:00
Malte Londschien
d239314967 Same for regressor. 2021-10-14 09:59:26 +02:00
Malte Londschien
4bae62ab2f Test. 2021-10-14 09:47:00 +02:00
Malte Londschien
e8cba343ca Initial implementation of predict_oob. 2021-10-14 09:34:45 +02:00
Luis Moreno
0b3bf946df chore: fix clippy warnings 2021-06-05 01:41:40 -04:00
Luis Moreno
763a8370eb docs: fix documentation of naive bayes structs 2021-06-05 00:25:34 -04:00
Luis Moreno
1208051fb5 Merge pull request #103 from smartcorelib/dependabot/add-v2-config-file 
Upgrade to GitHub-native Dependabot
 2021-04-29 12:40:54 -04:00
dependabot-preview[bot]
436d0a089f Upgrade to GitHub-native Dependabot 2021-04-29 16:13:20 +00:00
Luis Moreno
92265cc979 Merge pull request #99 from smartcorelib/dependabot/cargo/num-0.4.0 
build(deps): update num requirement from 0.3.0 to 0.4.0
 2021-04-28 18:02:58 -04:00
dependabot-preview[bot]
513d3898c9 build(deps): update num requirement from 0.3.0 to 0.4.0 
Updates the requirements on [num](https://github.com/rust-num/num) to permit the latest version.
- [Release notes](https://github.com/rust-num/num/releases)
- [Changelog](https://github.com/rust-num/num/blob/master/RELEASES.md)
- [Commits](https://github.com/rust-num/num/compare/num-0.3.0...num-0.4.0)

Signed-off-by: dependabot-preview[bot] <support@dependabot.com>
 2021-04-28 21:44:02 +00:00
Luis Moreno
4b654b25ac Merge pull request #97 from smartcorelib/dependabot/cargo/ndarray-0.15 
build(deps): update ndarray requirement from 0.14 to 0.15
 2021-04-28 17:41:56 -04:00
dependabot-preview[bot]
5a2e1f1262 build(deps): update ndarray requirement from 0.14 to 0.15 
Updates the requirements on [ndarray](https://github.com/rust-ndarray/ndarray) to permit the latest version.
- [Release notes](https://github.com/rust-ndarray/ndarray/releases)
- [Changelog](https://github.com/rust-ndarray/ndarray/blob/master/RELEASES.md)
- [Commits](https://github.com/rust-ndarray/ndarray/compare/ndarray-rand-0.14.0...0.15.1)

Signed-off-by: dependabot-preview[bot] <support@dependabot.com>
 2021-04-28 21:41:48 +00:00
Luis Moreno
377d5d0b06 Merge pull request #96 from smartcorelib/dependabot/cargo/rand-0.8.3 
build(deps): update rand requirement from 0.7.3 to 0.8.3
 2021-04-28 17:40:02 -04:00