Extends basic KNN search algorithm

This commit is contained in:
Volodymyr Orlov
2019-06-11 11:57:36 -07:00
parent f4d3a80490
commit a9ec6dfcd0
4 changed files with 222 additions and 53 deletions
+100 -23
View File
@@ -1,39 +1,81 @@
use super::Classifier;
use super::super::math::distance::Distance;
use super::super::math::distance::euclidian::EuclidianDistance;
use crate::math::distance::Distance;
use crate::math::distance::euclidian::EuclidianDistance;
use crate::algorithm::sort::heap_select::HeapSelect;
use ndarray::prelude::*;
use num_traits::Signed;
use num_traits::Float;
use num_traits::{Float, Num};
use std::marker::PhantomData;
use std::cmp::{Ordering, PartialOrd};
use std::fmt::Debug;
pub struct KNNClassifier<E> {
y: Option<Array1<E>>
}
pub trait KNNAlgorithm<T>{
fn find(&self, from: &T, k: i32) -> &Vec<T>;
pub trait KNNAlgorithm<T: Clone + Debug>{
fn find(&self, from: &T, k: usize) -> Vec<&T>;
}
pub struct SimpleKNNAlgorithm<T, A, D>
where
A: Float,
D: Distance<T, A>
pub struct SimpleKNNAlgorithm<T, D: Distance<T>>
{
data: Vec<T>,
distance: D,
__phantom: PhantomData<A>
distance: D
}
impl<T, A, D> KNNAlgorithm<T> for SimpleKNNAlgorithm<T, A, D>
where
A: Float,
D: Distance<T, A>
impl<T: Clone + Debug, D: Distance<T>> KNNAlgorithm<T> for SimpleKNNAlgorithm<T, D>
{
fn find(&self, from: &T, k: i32) -> &Vec<T> {
&self.data
fn find(&self, from: &T, k: usize) -> Vec<&T> {
if k < 1 || k > self.data.len() {
panic!("k should be >= 1 and <= length(data)");
}
let mut heap = HeapSelect::<KNNPoint>::with_capacity(k);
for _ in 0..k {
heap.add(KNNPoint{
distance: Float::infinity(),
index: None
});
}
for i in 0..self.data.len() {
let d = D::distance(&from, &self.data[i]);
let datum = heap.peek_mut();
if d < datum.distance {
datum.distance = d;
datum.index = Some(i);
heap.heapify();
}
}
heap.sort();
heap.get().into_iter().flat_map(|x| x.index).map(|i| &self.data[i]).collect()
}
}
#[derive(Debug)]
struct KNNPoint {
distance: f64,
index: Option<usize>
}
impl PartialOrd for KNNPoint {
fn partial_cmp(&self, other: &Self) -> Option<Ordering> {
self.distance.partial_cmp(&other.distance)
}
}
impl PartialEq for KNNPoint {
fn eq(&self, other: &Self) -> bool {
self.distance == other.distance
}
}
impl Eq for KNNPoint {}
impl<A1, A2> Classifier<A1, A2> for KNNClassifier<A2>
where
A2: Signed + Clone,
@@ -51,7 +93,15 @@ where
#[cfg(test)]
mod tests {
use super::*;
use super::*;
struct SimpleDistance{}
impl Distance<i32> for SimpleDistance {
fn distance(a: &i32, b: &i32) -> f64 {
(a - b).abs() as f64
}
}
#[test]
fn knn_fit_predict() {
@@ -64,13 +114,40 @@ mod tests {
}
#[test]
fn knn_find() {
fn knn_find() {
let sKnn = SimpleKNNAlgorithm{
data: vec!(arr1(&[1., 2.]), arr1(&[1., 2.]), arr1(&[1., 2.])),
distance: EuclidianDistance{},
__phantom: PhantomData
data: vec!(1, 2, 3, 4, 5, 6, 7, 8, 9, 10),
distance: SimpleDistance{}
};
assert_eq!(vec!(&2, &3, &1), sKnn.find(&2, 3));
}
#[test]
fn knn_point_eq() {
let point1 = KNNPoint{
distance: 10.,
index: Some(0)
};
assert_eq!(&vec!(arr1(&[1., 2.]), arr1(&[1., 2.]), arr1(&[1., 2.])), sKnn.find(&arr1(&[1., 2.]), 3));
let point2 = KNNPoint{
distance: 100.,
index: Some(1)
};
let point3 = KNNPoint{
distance: 10.,
index: Some(2)
};
let point_inf = KNNPoint{
distance: Float::infinity(),
index: Some(3)
};
assert!(point2 > point1);
assert_eq!(point3, point1);
assert_ne!(point3, point2);
assert!(point_inf > point3 && point_inf > point2 && point_inf > point1);
}
}