feat: consolidates API

This commit is contained in:
Volodymyr Orlov
2020-12-24 18:36:23 -08:00
parent a69fb3aada
commit 810a5c429b
25 changed files with 400 additions and 98 deletions
+32 -8
View File
@@ -34,7 +34,7 @@
//! &[5.2, 2.7, 3.9, 1.4],
//! ]);
//!
//! let svd = SVD::fit(&iris, 2, Default::default()).unwrap(); // Reduce number of features to 2
//! let svd = SVD::fit(&iris, SVDParameters::default().with_n_components(2)).unwrap(); // Reduce number of features to 2
//!
//! let iris_reduced = svd.transform(&iris).unwrap();
//!
@@ -47,6 +47,7 @@ use std::marker::PhantomData;
use serde::{Deserialize, Serialize};
use crate::api::{Transformer, UnsupervisedEstimator};
use crate::error::Failed;
use crate::linalg::Matrix;
use crate::math::num::RealNumber;
@@ -67,11 +68,34 @@ impl<T: RealNumber, M: Matrix<T>> PartialEq for SVD<T, M> {
#[derive(Debug, Clone)]
/// SVD parameters
pub struct SVDParameters {}
pub struct SVDParameters {
/// Number of components to keep.
pub n_components: usize,
}
impl Default for SVDParameters {
fn default() -> Self {
SVDParameters {}
SVDParameters { n_components: 2 }
}
}
impl SVDParameters {
/// Number of components to keep.
pub fn with_n_components(mut self, n_components: usize) -> Self {
self.n_components = n_components;
self
}
}
impl<T: RealNumber, M: Matrix<T>> UnsupervisedEstimator<M, SVDParameters> for SVD<T, M> {
fn fit(x: &M, parameters: SVDParameters) -> Result<Self, Failed> {
SVD::fit(x, parameters)
}
}
impl<T: RealNumber, M: Matrix<T>> Transformer<M> for SVD<T, M> {
fn transform(&self, x: &M) -> Result<M, Failed> {
self.transform(x)
}
}
@@ -80,10 +104,10 @@ impl<T: RealNumber, M: Matrix<T>> SVD<T, M> {
/// * `data` - _NxM_ matrix with _N_ observations and _M_ features in each observation.
/// * `n_components` - number of components to keep.
/// * `parameters` - other parameters, use `Default::default()` to set parameters to default values.
pub fn fit(x: &M, n_components: usize, _: SVDParameters) -> Result<SVD<T, M>, Failed> {
pub fn fit(x: &M, parameters: SVDParameters) -> Result<SVD<T, M>, Failed> {
let (_, p) = x.shape();
if n_components >= p {
if parameters.n_components >= p {
return Err(Failed::fit(&format!(
"Number of components, n_components should be < number of attributes ({})",
p
@@ -92,7 +116,7 @@ impl<T: RealNumber, M: Matrix<T>> SVD<T, M> {
let svd = x.svd()?;
let components = svd.V.slice(0..p, 0..n_components);
let components = svd.V.slice(0..p, 0..parameters.n_components);
Ok(SVD {
components,
@@ -189,7 +213,7 @@ mod tests {
&[197.28420365, -11.66808306],
&[293.43187394, 1.91163633],
]);
let svd = SVD::fit(&x, 2, Default::default()).unwrap();
let svd = SVD::fit(&x, Default::default()).unwrap();
let x_transformed = svd.transform(&x).unwrap();
@@ -225,7 +249,7 @@ mod tests {
&[5.2, 2.7, 3.9, 1.4],
]);
let svd = SVD::fit(&iris, 2, Default::default()).unwrap();
let svd = SVD::fit(&iris, Default::default()).unwrap();
let deserialized_svd: SVD<f64, DenseMatrix<f64>> =
serde_json::from_str(&serde_json::to_string(&svd).unwrap()).unwrap();