Complete grid search params (#166)
* grid search draft * hyperparam search for linear estimators * grid search for ensembles * support grid search for more algos * grid search for unsupervised algos * minor cleanup
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-5
@@ -33,7 +33,7 @@ use crate::linalg::BaseVector;
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use crate::math::num::RealNumber;
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/// Defines a kernel function
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pub trait Kernel<T: RealNumber, V: BaseVector<T>> {
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pub trait Kernel<T: RealNumber, V: BaseVector<T>>: Clone {
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/// Apply kernel function to x_i and x_j
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fn apply(&self, x_i: &V, x_j: &V) -> T;
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}
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@@ -95,12 +95,12 @@ impl Kernels {
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/// Linear Kernel
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#[cfg_attr(feature = "serde", derive(Serialize, Deserialize))]
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#[derive(Debug, Clone)]
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#[derive(Debug, Clone, PartialEq, Eq)]
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pub struct LinearKernel {}
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/// Radial basis function (Gaussian) kernel
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#[cfg_attr(feature = "serde", derive(Serialize, Deserialize))]
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#[derive(Debug, Clone)]
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#[derive(Debug, Clone, PartialEq, Eq)]
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pub struct RBFKernel<T: RealNumber> {
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/// kernel coefficient
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pub gamma: T,
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@@ -108,7 +108,7 @@ pub struct RBFKernel<T: RealNumber> {
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/// Polynomial kernel
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#[cfg_attr(feature = "serde", derive(Serialize, Deserialize))]
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#[derive(Debug, Clone)]
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#[derive(Debug, Clone, PartialEq, Eq)]
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pub struct PolynomialKernel<T: RealNumber> {
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/// degree of the polynomial
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pub degree: T,
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@@ -120,7 +120,7 @@ pub struct PolynomialKernel<T: RealNumber> {
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/// Sigmoid (hyperbolic tangent) kernel
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#[cfg_attr(feature = "serde", derive(Serialize, Deserialize))]
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#[derive(Debug, Clone)]
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#[derive(Debug, Clone, PartialEq, Eq)]
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pub struct SigmoidKernel<T: RealNumber> {
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/// kernel coefficient
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pub gamma: T,
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+121
@@ -102,6 +102,109 @@ pub struct SVCParameters<T: RealNumber, M: Matrix<T>, K: Kernel<T, M::RowVector>
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m: PhantomData<M>,
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}
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/// SVC grid search parameters
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#[cfg_attr(feature = "serde", derive(Serialize, Deserialize))]
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#[derive(Debug, Clone)]
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pub struct SVCSearchParameters<T: RealNumber, M: Matrix<T>, K: Kernel<T, M::RowVector>> {
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/// Number of epochs.
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pub epoch: Vec<usize>,
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/// Regularization parameter.
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pub c: Vec<T>,
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/// Tolerance for stopping epoch.
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pub tol: Vec<T>,
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/// The kernel function.
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pub kernel: Vec<K>,
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/// Unused parameter.
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m: PhantomData<M>,
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}
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/// SVC grid search iterator
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pub struct SVCSearchParametersIterator<T: RealNumber, M: Matrix<T>, K: Kernel<T, M::RowVector>> {
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svc_search_parameters: SVCSearchParameters<T, M, K>,
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current_epoch: usize,
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current_c: usize,
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current_tol: usize,
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current_kernel: usize,
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}
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impl<T: RealNumber, M: Matrix<T>, K: Kernel<T, M::RowVector>> IntoIterator
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for SVCSearchParameters<T, M, K>
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{
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type Item = SVCParameters<T, M, K>;
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type IntoIter = SVCSearchParametersIterator<T, M, K>;
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fn into_iter(self) -> Self::IntoIter {
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SVCSearchParametersIterator {
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svc_search_parameters: self,
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current_epoch: 0,
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current_c: 0,
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current_tol: 0,
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current_kernel: 0,
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}
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}
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}
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impl<T: RealNumber, M: Matrix<T>, K: Kernel<T, M::RowVector>> Iterator
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for SVCSearchParametersIterator<T, M, K>
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{
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type Item = SVCParameters<T, M, K>;
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fn next(&mut self) -> Option<Self::Item> {
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if self.current_epoch == self.svc_search_parameters.epoch.len()
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&& self.current_c == self.svc_search_parameters.c.len()
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&& self.current_tol == self.svc_search_parameters.tol.len()
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&& self.current_kernel == self.svc_search_parameters.kernel.len()
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{
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return None;
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}
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let next = SVCParameters::<T, M, K> {
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epoch: self.svc_search_parameters.epoch[self.current_epoch],
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c: self.svc_search_parameters.c[self.current_c],
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tol: self.svc_search_parameters.tol[self.current_tol],
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kernel: self.svc_search_parameters.kernel[self.current_kernel].clone(),
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m: PhantomData,
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};
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if self.current_epoch + 1 < self.svc_search_parameters.epoch.len() {
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self.current_epoch += 1;
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} else if self.current_c + 1 < self.svc_search_parameters.c.len() {
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self.current_epoch = 0;
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self.current_c += 1;
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} else if self.current_tol + 1 < self.svc_search_parameters.tol.len() {
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self.current_epoch = 0;
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self.current_c = 0;
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self.current_tol += 1;
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} else if self.current_kernel + 1 < self.svc_search_parameters.kernel.len() {
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self.current_epoch = 0;
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self.current_c = 0;
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self.current_tol = 0;
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self.current_kernel += 1;
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} else {
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self.current_epoch += 1;
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self.current_c += 1;
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self.current_tol += 1;
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self.current_kernel += 1;
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}
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Some(next)
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}
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}
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impl<T: RealNumber, M: Matrix<T>> Default for SVCSearchParameters<T, M, LinearKernel> {
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fn default() -> Self {
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let default_params: SVCParameters<T, M, LinearKernel> = SVCParameters::default();
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SVCSearchParameters {
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epoch: vec![default_params.epoch],
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c: vec![default_params.c],
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tol: vec![default_params.tol],
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kernel: vec![default_params.kernel],
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m: PhantomData,
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}
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}
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}
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#[cfg_attr(feature = "serde", derive(Serialize, Deserialize))]
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#[derive(Debug)]
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#[cfg_attr(
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@@ -737,6 +840,24 @@ mod tests {
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#[cfg(feature = "serde")]
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use crate::svm::*;
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#[test]
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fn search_parameters() {
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let parameters: SVCSearchParameters<f64, DenseMatrix<f64>, LinearKernel> =
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SVCSearchParameters {
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epoch: vec![10, 100],
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kernel: vec![LinearKernel {}],
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..Default::default()
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};
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let mut iter = parameters.into_iter();
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let next = iter.next().unwrap();
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assert_eq!(next.epoch, 10);
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assert_eq!(next.kernel, LinearKernel {});
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let next = iter.next().unwrap();
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assert_eq!(next.epoch, 100);
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assert_eq!(next.kernel, LinearKernel {});
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assert!(iter.next().is_none());
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}
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#[cfg_attr(target_arch = "wasm32", wasm_bindgen_test::wasm_bindgen_test)]
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#[test]
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fn svc_fit_predict() {
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+121
@@ -94,6 +94,109 @@ pub struct SVRParameters<T: RealNumber, M: Matrix<T>, K: Kernel<T, M::RowVector>
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m: PhantomData<M>,
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}
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/// SVR grid search parameters
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#[cfg_attr(feature = "serde", derive(Serialize, Deserialize))]
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#[derive(Debug, Clone)]
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pub struct SVRSearchParameters<T: RealNumber, M: Matrix<T>, K: Kernel<T, M::RowVector>> {
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/// Epsilon in the epsilon-SVR model.
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pub eps: Vec<T>,
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/// Regularization parameter.
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pub c: Vec<T>,
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/// Tolerance for stopping eps.
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pub tol: Vec<T>,
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/// The kernel function.
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pub kernel: Vec<K>,
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/// Unused parameter.
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m: PhantomData<M>,
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}
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/// SVR grid search iterator
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pub struct SVRSearchParametersIterator<T: RealNumber, M: Matrix<T>, K: Kernel<T, M::RowVector>> {
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svr_search_parameters: SVRSearchParameters<T, M, K>,
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current_eps: usize,
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current_c: usize,
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current_tol: usize,
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current_kernel: usize,
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}
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impl<T: RealNumber, M: Matrix<T>, K: Kernel<T, M::RowVector>> IntoIterator
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for SVRSearchParameters<T, M, K>
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{
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type Item = SVRParameters<T, M, K>;
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type IntoIter = SVRSearchParametersIterator<T, M, K>;
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fn into_iter(self) -> Self::IntoIter {
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SVRSearchParametersIterator {
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svr_search_parameters: self,
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current_eps: 0,
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current_c: 0,
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current_tol: 0,
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current_kernel: 0,
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}
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}
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}
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impl<T: RealNumber, M: Matrix<T>, K: Kernel<T, M::RowVector>> Iterator
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for SVRSearchParametersIterator<T, M, K>
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{
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type Item = SVRParameters<T, M, K>;
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fn next(&mut self) -> Option<Self::Item> {
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if self.current_eps == self.svr_search_parameters.eps.len()
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&& self.current_c == self.svr_search_parameters.c.len()
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&& self.current_tol == self.svr_search_parameters.tol.len()
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&& self.current_kernel == self.svr_search_parameters.kernel.len()
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{
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return None;
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}
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let next = SVRParameters::<T, M, K> {
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eps: self.svr_search_parameters.eps[self.current_eps],
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c: self.svr_search_parameters.c[self.current_c],
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tol: self.svr_search_parameters.tol[self.current_tol],
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kernel: self.svr_search_parameters.kernel[self.current_kernel].clone(),
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m: PhantomData,
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};
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if self.current_eps + 1 < self.svr_search_parameters.eps.len() {
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self.current_eps += 1;
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} else if self.current_c + 1 < self.svr_search_parameters.c.len() {
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self.current_eps = 0;
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self.current_c += 1;
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} else if self.current_tol + 1 < self.svr_search_parameters.tol.len() {
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self.current_eps = 0;
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self.current_c = 0;
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self.current_tol += 1;
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} else if self.current_kernel + 1 < self.svr_search_parameters.kernel.len() {
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self.current_eps = 0;
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self.current_c = 0;
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self.current_tol = 0;
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self.current_kernel += 1;
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} else {
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self.current_eps += 1;
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self.current_c += 1;
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self.current_tol += 1;
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self.current_kernel += 1;
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}
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Some(next)
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}
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}
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impl<T: RealNumber, M: Matrix<T>> Default for SVRSearchParameters<T, M, LinearKernel> {
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fn default() -> Self {
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let default_params: SVRParameters<T, M, LinearKernel> = SVRParameters::default();
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SVRSearchParameters {
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eps: vec![default_params.eps],
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c: vec![default_params.c],
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tol: vec![default_params.tol],
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kernel: vec![default_params.kernel],
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m: PhantomData,
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}
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}
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}
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#[cfg_attr(feature = "serde", derive(Serialize, Deserialize))]
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#[derive(Debug)]
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#[cfg_attr(
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@@ -536,6 +639,24 @@ mod tests {
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#[cfg(feature = "serde")]
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use crate::svm::*;
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#[test]
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fn search_parameters() {
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let parameters: SVRSearchParameters<f64, DenseMatrix<f64>, LinearKernel> =
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SVRSearchParameters {
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eps: vec![0., 1.],
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kernel: vec![LinearKernel {}],
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..Default::default()
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};
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let mut iter = parameters.into_iter();
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let next = iter.next().unwrap();
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assert_eq!(next.eps, 0.);
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assert_eq!(next.kernel, LinearKernel {});
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let next = iter.next().unwrap();
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assert_eq!(next.eps, 1.);
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assert_eq!(next.kernel, LinearKernel {});
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assert!(iter.next().is_none());
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}
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#[cfg_attr(target_arch = "wasm32", wasm_bindgen_test::wasm_bindgen_test)]
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#[test]
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fn svr_fit_predict() {
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